Continuous Gene Set Analysis
This application performs GSEA on continuous data using INDRA CoGEx.
Minimum Evidence Count
The minimum number of evidences, if using INDRA path-based analysis.
The minimum belief score, if using INDRA path-based analysis.
Keep insignificant results (leads to long results lists)
The alpha is the threshold for significance in the Fisher's exact test with which multiple hypothesis testing correction will be executed.
Gene Set Source
The source of gene sets. Only one can be run at a time because this analyis is computationally intensive
The number of permutations used with GSEA